Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC153H235N47O60S8

DescriptionStandard

        QQCGSQAGGALCANGLCCSEYGYCGTTTAYCGSGCQSQCN
    

Molecular Weight3949.30 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.32

Net Charge (pH 7.4) -1.65

Charge Density (pH 7.0) -0.0330

GRAVY Index-0.14

Hydrophobic Moment 0.30

Boman Index0.10

Instability Index25.18

Aliphatic Index 29.50

Aromaticity 0.0750

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1739.45

LogP -31.13

H-bond Donors 67.0

H-bond Acceptors 67.0

Rotatable Bonds 126.0

Heavy Atoms 268.0

Ring Count 3.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0373073 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum tuberosum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)