Peptide Database

Peptide NamePeptide chain B in PDB 4DGB

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC26H42N6O7

DescriptionStandard

        PGPLPA
    

Molecular Weight550.65 Da

Isoelectric Point (pI)5.96

Net Charge (pH 7.0)-0.04

Net Charge (pH 7.4) -0.10

Charge Density (pH 7.0) -0.0069

GRAVY Index0.07

Hydrophobic Moment 0.01

Boman Index0.42

Instability Index72.53

Aliphatic Index 81.67

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 177.25

LogP -1.04

H-bond Donors 5.0

H-bond Acceptors 7.0

Rotatable Bonds 11.0

Heavy Atoms 39.0

Ring Count 3.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0172912 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4DGB receptor chain A

MethodProtein-peptide complex structure