Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length362 amino acids

Chemical FormulaC1727H2722N490O526S10

DescriptionStandard

        MKPGLVSSGGGFLPRPTAEPKPIFRAPEQWPLPKSRDDLVFAKSCTAENWRSTDAGTTREPASNFGRIMLAGAMLMPSASTAIASALGADLALGRIAGGGIMQQRLTWAVRGAGGPASVFVLGMLPSKMADGTLYTDDQLRRLSHATTRVRFQFRRDADGVLQVYGIHSGPSGDDSVRTVQVTWNADQTAMEATLNGITLIWTPQQTPLGSLPPLTYPDDNGKQLGTILVHPIAEDVDSQIDGLSGEDVTADDGILVFPADTGLDALYVVFARPAKGDHKYYPPPKGLIAFPDAKIATRKTPVKGGGGLRKRWKTRDGTIYEWECQHGKVEKYNKRGKHLGEFDSETGEQTKDADNTREVEP
    

Molecular Weight39085.71 Da

Isoelectric Point (pI)6.61

Net Charge (pH 7.0)-0.95

Net Charge (pH 7.4) -1.58

Charge Density (pH 7.0) -0.0026

GRAVY Index-0.43

Hydrophobic Moment 0.75

Boman Index-0.01

Instability Index36.92

Aliphatic Index 73.89

Aromaticity 0.0718

Extinction Coeff. Reduced 50420.00

Extinction Coeff. Oxidized 50545.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0069057 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas frederiksbergensis [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal

MethodQualitative functional evidence