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MYP_129494
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Basic Information
VrD1 (V.radiata defensin 1; Plants)
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antifungal
Enzyme modulation ▸ Enzyme inhibition ▸ Amylase inhibition ▸ Alpha-amylase inhibitory
Immunology ▸ Innate immune defense ▸ Host defense peptide ▸ Host defense activity
Insecticidal/Pest control ▸ Insecticidal activity
Standard
46 amino acids
C211H348N66O62S10
Standard
Sequence
RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVNC
Physicochemical Analysis
5122.08 Da
9.06
5.76
5.38
0.1253
-0.28
0.49
-0.09
17.38
50.87
0.0652
8480.00
8980.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
2098.80
-25.26
84.0
79.0
173.0
349.0
5.0
48.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0286968 VERIFIED: NO
Provenance & Taxonomy
Vigna radiata [Plant]
Defensin
Structure & Mods
disulfide-constrained cyclic peptide [Cyclic]
canonical L-amino-acid peptide [L]
3-46; 13-33; 19-40; 23-42
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-insecticidal
Callosobruchus chinensis
RECORD: Rec_0303402 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Animal]
Defensin
Structure & Mods
topology not specified [Not included yet]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antifungal
bruchid larva
PaperPubMed PMID: 15080630 PMID15080630 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/15080630/
RECORD: Rec_0307604 VERIFIED: YES
Provenance & Taxonomy
not reported [other]
Structure & Mods
linear peptide; DSSP H 30.4%, E 32.6%, T 17.4%, C 19.6% [Linear]
canonical L-amino-acid peptide [L]
None
None
Bio-Activity Profile
Antibacterial Antimicrobial Antifungal Insecticidal
PaperPhytAMP: a database dedicated to antimicrobial plant peptides PMID18836196 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18836196/
RECORD: Rec_0309357 VERIFIED: NO
Provenance & Taxonomy
synthetic construct [Synthetic]
Designed peptide
32630
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
RECORD: Rec_0351317 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Animal]
Defensin
Structure & Mods
topology not specified [Not included yet]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antifungal
Rhizoctonia solani
PaperPubMed PMID: 15080630 PMID15080630 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/15080630/
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