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MYP_129494
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Basic Information
VrD1 (V.radiata defensin 1; Plants)
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antifungal
Enzyme modulation ▸ Enzyme inhibition ▸ Amylase inhibition ▸ Alpha-amylase inhibitory
Immunology ▸ Innate immune defense ▸ Host defense peptide ▸ Host defense activity
Insecticidal/Pest control ▸ Insecticidal activity
Standard
46 amino acids
C211H348N66O62S10
Standard
Sequence
RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVNC
Physicochemical Analysis
5122.08 Da
9.06
5.76
5.38
0.1253
-0.28
0.49
-0.09
17.38
50.87
0.0652
8480.00
8980.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
2098.80
-25.26
84.0
79.0
173.0
349.0
5.0
48.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0197992 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Plant]; Vigna nakashimae [Plant]
Defensin
Structure & Mods
disulfide-constrained cyclic peptide [Cyclic]
canonical L-amino-acid peptide [L]
multiple disulfide bonds reported, sites not specified
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Insecticidal Alpha-amylase Inhibitory
Pyricularia oryzae
20.7 μg/mL
IC50
PaperPubMed PMID 15080630 | PubMed PMID 16544320 PMID15080630;16544320 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/15080630/
RECORD: Rec_0201970 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antifungal Insecticidal
Fusarium oxysporum
30-53.2 μg/mL
IC50
PaperCloning and functional expression of a mungbean defensin VrD1 in Pichia pastoris
RECORD: Rec_0234895 VERIFIED: NO
Provenance & Taxonomy
Vigna radiata [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
PaperPlant Defensin Evidence URLhttps://www.uniprot.org/uniprotkb/Q6T418/entry
RECORD: Rec_0243102 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Plant]
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
3-46; 13-33; 19-40; 23-42
Bio-Activity Profile
Antimicrobial Host defense
PaperPDB 1TI5 structural record; NMR; chain A; residues 1-46
RECORD: Rec_0243697 VERIFIED: YES
Provenance & Taxonomy
Vigna radiata [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antifungal Insecticidal
S.enteritidis
>1000 μg/mL
IC50
PaperCloning and functional expression of a mungbean defensin VrD1 in Pichia pastoris
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