Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length187 amino acids

Chemical FormulaC906H1439N285O251S3

DescriptionStandard

        MDLSAVGRAVLIAREGRRLEAYRDSVGVWTIGIGHTAAAGPPVPRAGLRIEAGEADAIFTRDVAAFVRTVAETIPEPLPQHAFDALVSLCFNIGPAAFRRSTVLRRLRAGDRAGAGEAILMWNRPAAIIPRRQGEFDQFHTPYETALPRARRSDAQPVAAPVERPSSPSSARPGWRARLWDWLRAGR
    

Molecular Weight20436.07 Da

Isoelectric Point (pI)11.25

Net Charge (pH 7.0)7.79

Net Charge (pH 7.4) 7.38

Charge Density (pH 7.0) 0.0416

GRAVY Index-0.22

Hydrophobic Moment 0.69

Boman Index-0.04

Instability Index61.59

Aliphatic Index 83.69

Aromaticity 0.0749

Extinction Coeff. Reduced 30480.00

Extinction Coeff. Oxidized 30480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8523.18

LogP -98.10

H-bond Donors 306.0

H-bond Acceptors 265.0

Rotatable Bonds 645.0

Heavy Atoms 1445.0

Ring Count 38.0

Amide Bonds 192.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0164254 VERIFIED: NO

Provenance & Taxonomy

OrganismMethylorubrum extorquens [Archaea]

FamilyLysozyme

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic

MethodQualitative functional evidence

RECORD: Rec_0186262 VERIFIED: NO

Provenance & Taxonomy

OrganismMethylorubrum zatmanii [Bacterium]

FamilyGlycosyl hydrolase 24

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic