Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC150H243N51O50S4

DescriptionStandard

        GPVTVEARTCESKSHRFKGPCVSGNNCKNVCHNE
    

Molecular Weight3689.11 Da

Isoelectric Point (pI)8.52

Net Charge (pH 7.0)1.91

Net Charge (pH 7.4) 1.53

Charge Density (pH 7.0) 0.0560

GRAVY Index-0.84

Hydrophobic Moment 0.49

Boman Index-0.22

Instability Index20.39

Aliphatic Index 37.06

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1650.67

LogP -24.41

H-bond Donors 60.0

H-bond Acceptors 58.0

Rotatable Bonds 121.0

Heavy Atoms 255.0

Ring Count 5.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0286098 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsella rubella [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)