Peptide Database

Peptide Namekalata B16

Function Ontology

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Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC122H198N30O36S6

DescriptionStandard

        GIPCGESCVFIPCISGVIGCSCKSKVCY
    

Molecular Weight2853.45 Da

Isoelectric Point (pI)7.77

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.40

Charge Density (pH 7.0) 0.0250

GRAVY Index0.99

Hydrophobic Moment 0.32

Boman Index0.34

Instability Index20.91

Aliphatic Index 86.79

Aromaticity 0.0714

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1021.93

LogP -10.96

H-bond Donors 41.0

H-bond Acceptors 43.0

Rotatable Bonds 89.0

Heavy Atoms 194.0

Ring Count 4.0

Amide Bonds 27.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0242168 VERIFIED: YES

Provenance & Taxonomy

OrganismPigea floribunda [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)