Peptide Database

Peptide NamePeptide chain B in PDB 3AT0

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC43H64N14O20

DescriptionStandard

        WNSGSSGTGSTG
    

Molecular Weight1097.05 Da

Isoelectric Point (pI)5.53

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.44

Charge Density (pH 7.0) -0.0200

GRAVY Index-0.88

Hydrophobic Moment 0.16

Boman Index0.09

Instability Index14.28

Aliphatic Index 0.00

Aromaticity 0.0833

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 563.68

LogP -12.41

H-bond Donors 21.0

H-bond Acceptors 20.0

Rotatable Bonds 33.0

Heavy Atoms 77.0

Ring Count 2.0

Amide Bonds 12.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0245264 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3AT0 receptor chain A

MethodProtein-peptide complex structure