Peptide Database

Peptide NameLysozyme

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length169 amino acids

Chemical FormulaC872H1400N248O225S11

DescriptionStandard

        MRIGSKLVVLCLVCLPCLRLSAQDGRNALLSLPPFERGVVCIKHFESLHGFKDAPYVGYGHQLQKGERFTAAMTERQADSLLRADLMKRLMMFKDYGKDALLLAVLSYNVGTGRLLGYGRHPKSRLLRKIESGDRNFYCEFVSFCRYKGKVLRGLVKRRKVEFALFYVP
    

Molecular Weight19310.69 Da

Isoelectric Point (pI)9.92

Net Charge (pH 7.0)15.80

Net Charge (pH 7.4) 15.24

Charge Density (pH 7.0) 0.0935

GRAVY Index-0.07

Hydrophobic Moment 0.83

Boman Index-0.03

Instability Index33.11

Aliphatic Index 95.15

Aromaticity 0.1065

Extinction Coeff. Reduced 11920.00

Extinction Coeff. Oxidized 12295.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7633.09

LogP -70.28

H-bond Donors 279.0

H-bond Acceptors 256.0

Rotatable Bonds 652.0

Heavy Atoms 1356.0

Ring Count 28.0

Amide Bonds 175.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0108559 VERIFIED: NO

Provenance & Taxonomy

OrganismPorphyromonas endodontalis [Bacterium]

FamilyLysozyme

Tax ID28124

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic Non-hemolytic Non-ribosomal