Peptide Database

Peptide NameRecombinant Cy-AMP1 [Y44V], rCy-AMP1 [Y44V]

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antifungal

Standard StatusStandard

Sequence Length46 amino acids

Chemical FormulaC199H306N54O60S8

DescriptionStandard

        GSKGAPCAKKPCCGPLGHYKVDCSTIPDYPCCSKYGFCGSGPQVCG
    

Molecular Weight4671.40 Da

Isoelectric Point (pI)8.48

Net Charge (pH 7.0)2.76

Net Charge (pH 7.4) 2.38

Charge Density (pH 7.0) 0.0600

GRAVY Index-0.23

Hydrophobic Moment 0.41

Boman Index0.07

Instability Index9.28

Aliphatic Index 33.91

Aromaticity 0.0870

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1758.39

LogP -22.55

H-bond Donors 66.0

H-bond Acceptors 72.0

Rotatable Bonds 141.0

Heavy Atoms 321.0

Ring Count 11.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0349174 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

FamilyCathelicidin

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial Antifungal

TargetClavibacter michiganensis subsp. michiganensis NBRC 13763

Activity2.8 μg/mL

MethodIC50

RECORD: Rec_0427120 VERIFIED: YES