Peptide Database

Peptide NameRanacyclin-B-LK1

Function Ontology

—

Standard StatusStandard

Sequence Length19 amino acids

Chemical FormulaC95H146N26O24S2

DescriptionStandard

        AAFRGCWTKSYSPKPCLGK
    

Molecular Weight2100.47 Da

Isoelectric Point (pI)9.70

Net Charge (pH 7.0)3.77

Net Charge (pH 7.4) 3.55

Charge Density (pH 7.0) 0.1985

GRAVY Index-0.50

Hydrophobic Moment 0.28

Boman Index-0.06

Instability Index30.42

Aliphatic Index 31.05

Aromaticity 0.1579

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7115.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 806.21

LogP -7.72

H-bond Donors 31.0

H-bond Acceptors 30.0

Rotatable Bonds 64.0

Heavy Atoms 147.0

Ring Count 6.0

Amide Bonds 18.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0104998 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)