Peptide Database

Peptide NameAntimicrobial peptide, Lci

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length94 amino acids

Chemical FormulaC452H703N111O134S2

DescriptionStandard

        MKFKKVLTGSALSLALLMSAAPAFAASPTASASAENSPISTKADAGINAIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYESVDK
    

Molecular Weight9900.21 Da

Isoelectric Point (pI)9.44

Net Charge (pH 7.0)3.50

Net Charge (pH 7.4) 3.25

Charge Density (pH 7.0) 0.0372

GRAVY Index0.08

Hydrophobic Moment 0.51

Boman Index0.16

Instability Index24.80

Aliphatic Index 81.17

Aromaticity 0.1170

Extinction Coeff. Reduced 16960.00

Extinction Coeff. Oxidized 16960.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 3910.55

LogP -40.51

H-bond Donors 136.0

H-bond Acceptors 140.0

Rotatable Bonds 323.0

Heavy Atoms 699.0

Ring Count 17.0

Amide Bonds 98.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0197991 VERIFIED: NO

Provenance & Taxonomy

OrganismBacillus amyloliquefaciens subsp. plantarum [Bacterium]

FamilyDefensin

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial