‹ ›
MYP_126467
← PREVIOUS NEXT → BACK
Basic Information
Sugarcane defensin 5
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Antimicrobial ▸ Antifungal
Immunology ▸ Innate immune defense ▸ Host defense peptide ▸ Host defense activity
Standard
71 amino acids
C340H534N104O100S9
Standard
Sequence
HTPTPTPICKSRSHEYKGRCIQDMDCNAACVKESESYTGGFCNGRPPFKQCFCTKPCKRERAAATLRWPGL
Physicochemical Analysis
7967.10 Da
9.05
5.86
5.42
0.0825
-0.79
0.51
-0.20
55.43
33.10
0.0845
8480.00
8980.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
3278.38
-39.26
122.0
117.0
254.0
553.0
16.0
74.0
Structural Visualization
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.
2D CHEMICAL STRUCTURE
Drag to move
Drag to move. Use the buttons to zoom.
Experimental Records
RECORD: Rec_0305205 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-positive
Bacillus subtilis
PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
RECORD: Rec_0310794 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antifungal
F. solani
10 μM
IC50
PaperEvolutionary relationship between defensins in the Poaceae family strengthened by the characterization of new sugarcane defensins
RECORD: Rec_0370578 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Animal]
Defensin
Structure & Mods
topology not specified [Not included yet]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antifungal
Neurospora crassa and Fusarium solani
10-15 μM
IC50
PaperPubMed PMID: 18618271 PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
RECORD: Rec_0382869 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal
Neurospora crassa
15 μM
IC50
PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
FIRST PREV 1 2 3
Showing 4 records on this page · Page 3 of 3