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MYP_126467
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Basic Information
Sugarcane defensin 5
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Antimicrobial ▸ Antifungal
Immunology ▸ Innate immune defense ▸ Host defense peptide ▸ Host defense activity
Standard
71 amino acids
C340H534N104O100S9
Standard
Sequence
HTPTPTPICKSRSHEYKGRCIQDMDCNAACVKESESYTGGFCNGRPPFKQCFCTKPCKRERAAATLRWPGL
Physicochemical Analysis
7967.10 Da
9.05
5.86
5.42
0.0825
-0.79
0.51
-0.20
55.43
33.10
0.0845
8480.00
8980.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
3278.38
-39.26
122.0
117.0
254.0
553.0
16.0
74.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0208588 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal
Aspergillus niger
20 μM
IC50
PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
RECORD: Rec_0213775 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
9-57; 20-42; 26-51; 30-53
Bio-Activity Profile
Antimicrobial Host defense
PaperPDB 2KSK structural record; NMR; chain A; residues 1-71
RECORD: Rec_0246298 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal
Kocuria rhizophila
PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
RECORD: Rec_0270033 VERIFIED: YES
Provenance & Taxonomy
Saccharum officinarum [Plant]
Defensin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-negative
Escherichia coli
PMID18618271 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/18618271/
RECORD: Rec_0281808 VERIFIED: YES
Provenance & Taxonomy
Insecta [Animal]
50557
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
PMID22832495 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/22832495/
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