Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length196 amino acids

Chemical FormulaC878H1443N263O252S12

DescriptionStandard

        MATVELAPSKRARAAIAAVVLAAGAGGTVALISGAKPVPDDVALAVEVLVKPWEGRSLKAYLDTIAKPPVWTICDGDTTNVRPGMAETPAGCDKRLASKITAAYRGKLVACIPNWSKAPLSWRAMMTSLAWNIGAGAACGSTAARLGRAGRWLESCVAATAFNRAGGRMVVGLARRRGMGDAARIGEGELCASGVP
    

Molecular Weight20100.24 Da

Isoelectric Point (pI)9.86

Net Charge (pH 7.0)10.46

Net Charge (pH 7.4) 10.12

Charge Density (pH 7.0) 0.0534

GRAVY Index0.20

Hydrophobic Moment 0.70

Boman Index0.11

Instability Index35.71

Aliphatic Index 89.34

Aromaticity 0.0459

Extinction Coeff. Reduced 35980.00

Extinction Coeff. Oxidized 36355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8120.30

LogP -101.72

H-bond Donors 296.0

H-bond Acceptors 275.0

Rotatable Bonds 648.0

Heavy Atoms 1405.0

Ring Count 26.0

Amide Bonds 199.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0389302 VERIFIED: NO

Provenance & Taxonomy

OrganismPleomorphomonas carboxyditropha [Bacterium]

FamilyLysozyme

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic

MethodQualitative functional evidence