Peptide Database

Peptide NameNP-3

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length24 amino acids

Chemical FormulaC115H193N31O33

DescriptionStandard

        VGDSRSSIFDAKAGIALSKKFVKL
    

Molecular Weight2537.95 Da

Isoelectric Point (pI)10.00

Net Charge (pH 7.0)2.73

Net Charge (pH 7.4) 2.51

Charge Density (pH 7.0) 0.1138

GRAVY Index0.20

Hydrophobic Moment 0.45

Boman Index0.05

Instability Index45.30

Aliphatic Index 101.67

Aromaticity 0.0833

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1054.12

LogP -10.45

H-bond Donors 38.0

H-bond Acceptors 36.0

Rotatable Bonds 89.0

Heavy Atoms 179.0

Ring Count 2.0

Amide Bonds 23.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0232545 VERIFIED: NO

Provenance & Taxonomy

OrganismZanthoxylum bungeanum [Plant]

FamilyBacteriocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial