Peptide Database

Peptide NameCycloviolacin Y2

Function Ontology

—

Standard StatusStandard

Sequence Length22 amino acids

Chemical FormulaC94H145N23O32S6

DescriptionStandard

        CGETCTLGTCYTVGCTCSWPIC
    

Molecular Weight2301.68 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0590

GRAVY Index0.67

Hydrophobic Moment 0.15

Boman Index0.31

Instability Index24.18

Aliphatic Index 48.64

Aromaticity 0.0909

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 860.33

LogP -11.26

H-bond Donors 37.0

H-bond Acceptors 37.0

Rotatable Bonds 66.0

Heavy Atoms 155.0

Ring Count 4.0

Amide Bonds 21.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0112921 VERIFIED: YES

Provenance & Taxonomy

OrganismViola baoshanensis [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)