Peptide Database

Peptide NameApidaecin

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length126 amino acids

Chemical FormulaC627H987N187O180S3

DescriptionStandard

        MKLIVLVVFCAIAYVSAQAELEPEDYIPSRFRRQERGSIVIKGTKEGRNRPSLDIDYKQRVYDKNGMTGDAYGGVNIRPGQPARQRAGFEFGKEYKNGFIRGQSEVQRGPGGRLSPYVGINGGFRF
    

Molecular Weight14120.88 Da

Isoelectric Point (pI)9.88

Net Charge (pH 7.0)7.50

Net Charge (pH 7.4) 7.24

Charge Density (pH 7.0) 0.0596

GRAVY Index-0.60

Hydrophobic Moment 0.63

Boman Index-0.11

Instability Index39.11

Aliphatic Index 69.60

Aromaticity 0.1111

Extinction Coeff. Reduced 10430.00

Extinction Coeff. Oxidized 10430.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 5993.46

LogP -61.80

H-bond Donors 210.0

H-bond Acceptors 191.0

Rotatable Bonds 473.0

Heavy Atoms 997.0

Ring Count 21.0

Amide Bonds 137.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0355432 VERIFIED: NO

Provenance & Taxonomy

OrganismApis cerana cerana [Animal]

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial