Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length392 amino acids

Chemical FormulaC1876H2904N542O550S10

DescriptionStandard

        MADPTYLPEALKREGLNVTVLDGAMQRGHGDFANRYLIPFVHHTGASGTPGPWAIARHPELGLCSQLYLGRDGKVVLCGIGIAYHAGTGSWPGIPANQGNQYSIGTEAENNGTEGWGTAQYGSYLRIVRAINRAQGAPLNKVVAHKEYGAVQGKWDPGSLDMKLFRQRLLVADAPEKVIINMIDLEAKENPWVGVRKAKPGAEGETRIGRDGKGRLVAYDNAHIYFHPSTGAHAIPHADPRFEGSGLFEAYRRRGYELGELGYPVRDFSKIDGGAVMSFQGGILYVHDTLVGADGRKDHVVRGVIGQRWALEGYEDGPLGWPISDEVPNGTGGVMQMFEHGSLEWDKSGAVKRLADLGLSTQAVTNLNVVHQSGPQAGMPIAATHGVELIAA
    

Molecular Weight42171.08 Da

Isoelectric Point (pI)6.43

Net Charge (pH 7.0)-3.16

Net Charge (pH 7.4) -4.26

Charge Density (pH 7.0) -0.0081

GRAVY Index-0.31

Hydrophobic Moment 0.89

Boman Index0.06

Instability Index13.88

Aliphatic Index 81.40

Aromaticity 0.0816

Extinction Coeff. Reduced 66350.00

Extinction Coeff. Oxidized 66475.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0349584 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Upyo [Virus]

Tax ID2743989

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic Non-hemolytic Non-ribosomal