Peptide Database

Peptide NamePp-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC150H254N50O50S5

DescriptionStandard

        KSCCPNSTARNVYNTCRVVGGSRPTCAGLSGCKIVD
    

Molecular Weight3718.25 Da

Isoelectric Point (pI)9.07

Net Charge (pH 7.0)3.71

Net Charge (pH 7.4) 3.43

Charge Density (pH 7.0) 0.1031

GRAVY Index-0.15

Hydrophobic Moment 0.67

Boman Index-0.08

Instability Index25.98

Aliphatic Index 59.44

Aromaticity 0.0278

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1630.39

LogP -25.48

H-bond Donors 63.0

H-bond Acceptors 59.0

Rotatable Bonds 119.0

Heavy Atoms 255.0

Ring Count 3.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0088793 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsella rubella [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)