Peptide Database

Peptide NameApo5 APOC1

Function Ontology

—

Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC139H215N37O35

DescriptionStandard

        IPAKTRNWFSEAFKKVKEHLKTAFS
    

Molecular Weight2964.42 Da

Isoelectric Point (pI)10.17

Net Charge (pH 7.0)3.85

Net Charge (pH 7.4) 3.58

Charge Density (pH 7.0) 0.1539

GRAVY Index-0.68

Hydrophobic Moment 0.65

Boman Index-0.13

Instability Index7.67

Aliphatic Index 54.80

Aromaticity 0.1600

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1188.01

LogP -8.97

H-bond Donors 42.0

H-bond Acceptors 40.0

Rotatable Bonds 99.0

Heavy Atoms 211.0

Ring Count 7.0

Amide Bonds 25.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0345696 VERIFIED: YES

Provenance & Taxonomy

OrganismCanis lupus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)