Peptide Database

Peptide NamePhotorhabdus luminescens subsp. laumondii TTO1 complete genome

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length562 amino acids

Chemical FormulaC2773H4295N781O833S22

DescriptionStandard

        MAIGYYLLVGDKTTCGGQIITGDHTMTFNGRATAREGDKVTCGKHPGTYMIVGGISDMFDMGQRLAGTLDSVSTCPCRARFINSVMDSYEKQEQPRQQAVTPAYTATQNFSSPMKEATTVQSNPPPVTQVPPPPIPVFAKSRQRGKGCTDAGTETEPANNFGRMGIYQVLSSPAPVTESKPEQPPQGKKHPPEPDKPQDKKLPWYKRWFSNSKDKAEAAATAVAATTRSAVADGEALVMRFIGGGVTSAGRWLAAPNPLTVGLMGLFYSSGLNESEEDYLNQYHLSEIASQYGKAPTRVRFRWIRDEKSGRMTVQGYHVSPESGLDKVPVRMMKRNPVTGNYEFWEPGEYRPTILWTPNDQEFKVPPHTGNEEQPFIPSQITVLPIPDKVGSDIESLPMPEEKDFRDYILVFPAGSGMKPVYVMFNTPRNQPGVVTGQGQRVEGNWLSLAGQDMGAPIPSQIADKLRGRRFNNFDDFRRAFWKEVGNDPELSQQFNSHNKEFLKKSYSPYSPRQEHIGNREKYEIHHVKFIKDGGEVYNLDNLRVTTPKRHIEIHSSKGGIK
    

Molecular Weight62606.93 Da

Isoelectric Point (pI)8.78

Net Charge (pH 7.0)6.57

Net Charge (pH 7.4) 5.51

Charge Density (pH 7.0) 0.0117

GRAVY Index-0.68

Hydrophobic Moment 0.68

Boman Index-0.07

Instability Index49.68

Aliphatic Index 59.84

Aromaticity 0.0907

Extinction Coeff. Reduced 73800.00

Extinction Coeff. Oxidized 74050.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0036976 VERIFIED: NO

Provenance & Taxonomy

OrganismPhotorhabdus laumondii subsp. laumondii [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli

MethodQualitative functional evidence