Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC165H250N52O61S8

DescriptionStandard

        EQCGRQANGALCPNNLCCSQYGWCGDTDAYCKDGCQSQC
    

Molecular Weight4194.58 Da

Isoelectric Point (pI)4.23

Net Charge (pH 7.0)-2.24

Net Charge (pH 7.4) -2.53

Charge Density (pH 7.0) -0.0575

GRAVY Index-0.69

Hydrophobic Moment 0.50

Boman Index-0.11

Instability Index29.07

Aliphatic Index 27.69

Aromaticity 0.0769

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1859.11

LogP -28.30

H-bond Donors 69.0

H-bond Acceptors 67.0

Rotatable Bonds 135.0

Heavy Atoms 286.0

Ring Count 5.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0114165 VERIFIED: YES

Provenance & Taxonomy

OrganismCucumis melo [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)