Peptide Database

Peptide NamePeptide chain C in PDB 5M35

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC48H75N13O15S

DescriptionStandard

        LYRSPMPEN
    

Molecular Weight1106.25 Da

Isoelectric Point (pI)6.00

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.44

Charge Density (pH 7.0) -0.0265

GRAVY Index-1.23

Hydrophobic Moment 0.26

Boman Index-0.23

Instability Index147.50

Aliphatic Index 43.33

Aromaticity 0.1111

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 461.29

LogP -3.97

H-bond Donors 15.0

H-bond Acceptors 16.0

Rotatable Bonds 32.0

Heavy Atoms 77.0

Ring Count 3.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0313049 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5M35 receptor chain A

MethodProtein-peptide complex structure