Peptide Database

Peptide NameAntimicrobial peptide SsPR-AMP1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length43 amino acids

Chemical FormulaC241H337N65O48S

DescriptionStandard

        AMPASAGYFPGRPPFPRPFPRPPSRPFPRPPFPGPFPRPYPWR
    

Molecular Weight4944.73 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)6.79

Net Charge (pH 7.4) 6.60

Charge Density (pH 7.0) 0.1580

GRAVY Index-0.99

Hydrophobic Moment 0.78

Boman Index-0.08

Instability Index116.22

Aliphatic Index 6.98

Aromaticity 0.2093

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1657.31

LogP -9.52

H-bond Donors 52.0

H-bond Acceptors 56.0

Rotatable Bonds 118.0

Heavy Atoms 355.0

Ring Count 28.0

Amide Bonds 42.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0302517 VERIFIED: NO

Provenance & Taxonomy

OrganismScylla serrata [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial