Peptide Database

Peptide NamertCATH-1c

Function Ontology

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Standard StatusStandard

Sequence Length20 amino acids

Chemical FormulaC104H153N29O31

DescriptionStandard

        GVPLFIDEFIRDHSDGNRFA
    

Molecular Weight2305.50 Da

Isoelectric Point (pI)4.66

Net Charge (pH 7.0)-2.15

Net Charge (pH 7.4) -2.40

Charge Density (pH 7.0) -0.1073

GRAVY Index-0.28

Hydrophobic Moment 0.65

Boman Index0.02

Instability Index14.88

Aliphatic Index 78.00

Aromaticity 0.1500

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 972.43

LogP -8.43

H-bond Donors 33.0

H-bond Acceptors 30.0

Rotatable Bonds 73.0

Heavy Atoms 164.0

Ring Count 5.0

Amide Bonds 20.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0066715 VERIFIED: YES

Provenance & Taxonomy

OrganismOncorhynchus mykiss [Animal]

FamilyCathelicidin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)