Peptide Database

Peptide NameLysM domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length869 amino acids

Chemical FormulaC4299H6648N1158O1362S18

DescriptionStandard

        MSYKVLPLSEVMSHEFGLIEGNFHNISEADIASAIPSHLTFEQLKQHLYEGNLALVSDTPQTPALLSYNDPIGPKTWRLNSEVISELSDDAANNLLAITKTTRATGGYRSCIGETSTLERVYTPQPIATESEEEITKEFEYSFEVGCSDATIKKMVHSDFALAKTEKENAVTRWEQTNTEQGTRYTALCVFDEPKRLNIHIADDNLGLTPLEAVTLQKAGSCKTDEGFIPVVPAVRLGERLGLPTEGYYYHFNDGELVQEYKILGEEKWAFYATQSTQDKLNDERGFTKDQSAILVYWKLADQIIENQYIIYLERQITREELDNLSEDWLCENGIKLDIPALFDAVKQPEEARSEGNNDETQAEQTAATHTVTVGEDWQSIAELYGMGAKALLLLNPVFEADPLSLAVGDEIIVAEKQQQQAPDKKNTFPPLRPQTYNNIRNSHYQHSDPLLGLTKYRAINTADCIEGDVVILNLKDATSSIVFAKSCTRPEGCIEIGDQQESISNFGPWSFFFAQANANPAAVIPAIQATQAQMAMGSSAAVAGSPEQMQQTQTAAMQLDKLAGTLKEKIVEGYRWQVEGIGALFAMQQSLFGDNTQYTDQDLRQVTTAQSRVRVHITEPQGGEFYPHVQGYHVDDTRIPIKYVKQGNNGQLSVAIEENGPTIYWTPEENGEASWQTTPDHSDGFEKDDILVTPIHSDSDANVTVTPAPEEKDWRDAILVFPESSGIAPLYVVYKESPRDKPGVVTGKGEDIFGIWLADAGKDLGAPIPSQIADKLRGREFSSFDAFREGFWYAVGEDQTLINQFSRANQRLIKRGRSPFSLPSEQVGGRQRYELHHKEEIQYGGEVFHVDNLCVLTPKRHISIHKDQ
    

Molecular Weight96922.89 Da

Isoelectric Point (pI)4.75

Net Charge (pH 7.0)-51.64

Net Charge (pH 7.4) -53.28

Charge Density (pH 7.0) -0.0594

GRAVY Index-0.48

Hydrophobic Moment 0.81

Boman Index-0.01

Instability Index43.85

Aliphatic Index 79.84

Aromaticity 0.0863

Extinction Coeff. Reduced 116200.00

Extinction Coeff. Oxidized 116700.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0070647 VERIFIED: NO

Provenance & Taxonomy

OrganismVibrio parahaemolyticus [Bacterium]

Tax ID670

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic Non-ribosomal