Peptide Database

Peptide NameRuminococcin C5

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length44 amino acids

Chemical FormulaC172H275N59O59S4

DescriptionStandard

        AGCICSGSVAVANSHNAGPAYCVGYCGNNGAVTRNANANLARTA
    

Molecular Weight4241.64 Da

Isoelectric Point (pI)8.54

Net Charge (pH 7.0)1.84

Net Charge (pH 7.4) 1.54

Charge Density (pH 7.0) 0.0418

GRAVY Index0.14

Hydrophobic Moment 0.48

Boman Index0.14

Instability Index7.56

Aliphatic Index 66.82

Aromaticity 0.0455

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3230.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1901.55

LogP -31.57

H-bond Donors 69.0

H-bond Acceptors 66.0

Rotatable Bonds 131.0

Heavy Atoms 294.0

Ring Count 4.0

Amide Bonds 50.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0063589 VERIFIED: YES

Provenance & Taxonomy

OrganismRuminococcus gnavus [Bacterium]

FamilyBacteriocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

TargetC. perfringens CpA