Peptide Database

Peptide NamePeptide chain E in PDB 1Y3A

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC71H100N16O22S

DescriptionStandard

        SRVTWYDFLMED
    

Molecular Weight1561.71 Da

Isoelectric Point (pI)4.27

Net Charge (pH 7.0)-2.53

Net Charge (pH 7.4) -2.75

Charge Density (pH 7.0) -0.2110

GRAVY Index-0.50

Hydrophobic Moment 0.06

Boman Index-0.02

Instability Index35.12

Aliphatic Index 56.67

Aromaticity 0.2500

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 6990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 633.70

LogP -3.45

H-bond Donors 23.0

H-bond Acceptors 21.0

Rotatable Bonds 48.0

Heavy Atoms 110.0

Ring Count 4.0

Amide Bonds 11.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0304609 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1Y3A receptor chain A

MethodProtein-peptide complex structure