Peptide Database

Peptide NamePeptide chain E in PDB 1JJO

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length33 amino acids

Chemical FormulaC184H286N52O42S2

DescriptionStandard

        YPQVIVDHPFLYLIRNRKSGIILFMGRVMNPHH
    

Molecular Weight3962.69 Da

Isoelectric Point (pI)10.27

Net Charge (pH 7.0)3.02

Net Charge (pH 7.4) 2.66

Charge Density (pH 7.0) 0.0915

GRAVY Index0.04

Hydrophobic Moment 0.52

Boman Index0.11

Instability Index20.95

Aliphatic Index 109.09

Aromaticity 0.1212

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1493.17

LogP -7.83

H-bond Donors 51.0

H-bond Acceptors 50.0

Rotatable Bonds 125.0

Heavy Atoms 280.0

Ring Count 10.0

Amide Bonds 35.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0384741 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1JJO receptor chain C

MethodProtein-peptide complex structure