Peptide Database

Peptide NamePeptide chain P in PDB 2F9J

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length35 amino acids

Chemical FormulaC192H291N53O61S

DescriptionStandard

        EQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVL
    

Molecular Weight4349.75 Da

Isoelectric Point (pI)4.36

Net Charge (pH 7.0)-5.14

Net Charge (pH 7.4) -5.33

Charge Density (pH 7.0) -0.1470

GRAVY Index-1.22

Hydrophobic Moment 0.65

Boman Index-0.28

Instability Index70.36

Aliphatic Index 69.71

Aromaticity 0.1143

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1883.07

LogP -14.10

H-bond Donors 64.0

H-bond Acceptors 57.0

Rotatable Bonds 145.0

Heavy Atoms 307.0

Ring Count 8.0

Amide Bonds 37.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0285679 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2F9J receptor chain A

MethodProtein-peptide complex structure