Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC137H220N38O41S6

DescriptionStandard

        CGESCVWIPCVSAAIGCSCSNKICYRNGIIP
    

Molecular Weight3247.83 Da

Isoelectric Point (pI)7.77

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.41

Charge Density (pH 7.0) 0.0226

GRAVY Index0.67

Hydrophobic Moment 0.37

Boman Index0.25

Instability Index21.17

Aliphatic Index 88.06

Aromaticity 0.0645

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1247.08

LogP -14.34

H-bond Donors 49.0

H-bond Acceptors 48.0

Rotatable Bonds 100.0

Heavy Atoms 222.0

Ring Count 5.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0248692 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)