Peptide Database

Peptide NamePeptide chain J in PDB 5V2C

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC187H289N43O50S

DescriptionStandard

        ESEGGRIPLWIVATVAGMGVIVIVGLFFYGAYAGLGSSL
    

Molecular Weight3971.62 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.16

Net Charge (pH 7.4) -1.34

Charge Density (pH 7.0) -0.0298

GRAVY Index1.18

Hydrophobic Moment 0.40

Boman Index0.55

Instability Index34.43

Aliphatic Index 127.44

Aromaticity 0.1282

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1434.00

LogP -8.68

H-bond Donors 51.0

H-bond Acceptors 50.0

Rotatable Bonds 124.0

Heavy Atoms 281.0

Ring Count 7.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0136308 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5V2C receptor chain E

MethodProtein-peptide complex structure