Peptide Database

Peptide NameSD2

Function Ontology

—

Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC145H233N49O52S4

DescriptionStandard

        GPVTVEARTCESQSHRFKGTCVSASNCANVCHNE
    

Molecular Weight3622.96 Da

Isoelectric Point (pI)6.90

Net Charge (pH 7.0)-0.09

Net Charge (pH 7.4) -0.46

Charge Density (pH 7.0) -0.0027

GRAVY Index-0.49

Hydrophobic Moment 0.50

Boman Index-0.12

Instability Index41.20

Aliphatic Index 42.94

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1647.88

LogP -26.00

H-bond Donors 61.0

H-bond Acceptors 58.0

Rotatable Bonds 117.0

Heavy Atoms 250.0

Ring Count 4.0

Amide Bonds 37.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0188891 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)