Peptide Database

Peptide NamePutative Pyocin colicin protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length597 amino acids

Chemical FormulaC2831H4536N840O900S5

DescriptionStandard

        MATRKKRQANILHDQTSGTVNISHGSSPKPQNIGFFGGGFTNTGASSSKRRRRRLRARAQQQAAQAQAYAEAQAQAERQTTEHAAAQARAQTEAAERARIEAQVRAQTETDQAHRQALETLTNAYPSLQSGLAQNYSQTSGRLPNSIQEEIASKLDHNADYSNEQQIRDLILQEKARINYLIESKNSLLEERRAQALGLTGQELDHATQKDHLNYLVHYSQGDPQRVQQAHEAWVNALSQTYEAKLLADSVTLLNEQSAALSMRHAELSLANKAASQHAERASVRQAAGIDTLWSAVTPAATTTAASGIRTIATNIVKDQLIRVASRTLGSNLVTLLAMYPQPLGDSELPPAVIATPLSQLNLPPHIDLQYLASVKGTLDVPHRLTSHEAGTSGAVRWVAADGVTVSTKVRVRTFTYNAQNNSYEFIRDGESTPALVWTPIARPADSSTSSPVEPPALPTDPGNVVTPFVPELEAYPAIDRDDPDDYILISPIDSGLPDSYLLFKDPRSIPGIASGYGEPVTATWLRGPTASQPAPIPSSVAEKLSGRPFASFAKLREAIWLEVSKDPELSRQLGELNLQELSNKRAPRAPLVCCLK
    

Molecular Weight64899.72 Da

Isoelectric Point (pI)6.73

Net Charge (pH 7.0)-1.21

Net Charge (pH 7.4) -2.29

Charge Density (pH 7.0) -0.0020

GRAVY Index-0.47

Hydrophobic Moment 0.78

Boman Index-0.06

Instability Index53.47

Aliphatic Index 83.67

Aromaticity 0.0519

Extinction Coeff. Reduced 56840.00

Extinction Coeff. Oxidized 56965.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0262961 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae pv. delphinii [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal