Peptide Database

Peptide NameVv-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC119H200N46O40S4

DescriptionStandard

        RTCQSASHRFKGTCVRNSNCANICRTE
    

Molecular Weight3043.41 Da

Isoelectric Point (pI)9.37

Net Charge (pH 7.0)3.81

Net Charge (pH 7.4) 3.50

Charge Density (pH 7.0) 0.1413

GRAVY Index-0.83

Hydrophobic Moment 0.55

Boman Index-0.37

Instability Index35.37

Aliphatic Index 32.59

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1453.26

LogP -23.64

H-bond Donors 57.0

H-bond Acceptors 49.0

Rotatable Bonds 102.0

Heavy Atoms 209.0

Ring Count 2.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0240914 VERIFIED: YES

Provenance & Taxonomy

OrganismMorus notabilis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)