Peptide Database

Peptide NamePeptide chain B in PDB 5D94

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC61H94N12O24

DescriptionStandard

        DAVFDIITDEEL
    

Molecular Weight1379.46 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-5.23

Net Charge (pH 7.4) -5.44

Charge Density (pH 7.0) -0.4359

GRAVY Index0.28

Hydrophobic Moment 0.35

Boman Index0.21

Instability Index46.62

Aliphatic Index 130.00

Aromaticity 0.0833

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 590.15

LogP -3.68

H-bond Donors 19.0

H-bond Acceptors 19.0

Rotatable Bonds 45.0

Heavy Atoms 97.0

Ring Count 1.0

Amide Bonds 11.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0272396 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5D94 receptor chain A

MethodProtein-peptide complex structure