Peptide Database

Peptide NameCyclotide mden-A

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC120H193N33O42S6

DescriptionStandard

        GIPTCGETCTLGTCNTPGCTCSWPICTKN
    

Molecular Weight2962.40 Da

Isoelectric Point (pI)5.96

Net Charge (pH 7.0)-0.30

Net Charge (pH 7.4) -0.59

Charge Density (pH 7.0) -0.0103

GRAVY Index0.01

Hydrophobic Moment 0.18

Boman Index0.15

Instability Index31.00

Aliphatic Index 40.34

Aromaticity 0.0345

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5875.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1178.88

LogP -18.14

H-bond Donors 46.0

H-bond Acceptors 48.0

Rotatable Bonds 87.0

Heavy Atoms 201.0

Ring Count 5.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0145779 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial