Peptide Database

Peptide NamePeptide chain D in PDB 5JM4

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length7 amino acids

Chemical FormulaC30H50N8O13

DescriptionStandard

        QGDLDLA
    

Molecular Weight730.76 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.24

Net Charge (pH 7.4) -2.44

Charge Density (pH 7.0) -0.3197

GRAVY Index-0.21

Hydrophobic Moment 0.21

Boman Index0.08

Instability Index8.57

Aliphatic Index 125.71

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 355.61

LogP -3.73

H-bond Donors 11.0

H-bond Acceptors 11.0

Rotatable Bonds 24.0

Heavy Atoms 51.0

Ring Count 0.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0421635 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5JM4 receptor chain A

MethodProtein-peptide complex structure