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MYP_114155
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Basic Information
Variacin
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Standard
25 amino acids
C118H175N31O36S4
Standard
Sequence
GSGVIPTISHECHMNSFQFVFTCCS
Physicochemical Analysis
2732.10 Da
5.98
-1.09
-1.44
-0.0437
0.45
0.30
0.28
36.05
54.40
0.1200
0.00
125.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
1055.15
-12.85
39.0
41.0
84.0
189.0
6.0
26.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0359468 VERIFIED: YES
Provenance & Taxonomy
Micrococcus varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Listeria innocua (++)
PaperPubMed PMID: 8633879 PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0366580 VERIFIED: YES
Provenance & Taxonomy
Kocuria varians [other]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Lactobacillus plantarum
PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0373476 VERIFIED: YES
Provenance & Taxonomy
not reported [other]
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
-
Escherichia coli TOP10
Mex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)
PaperKoch P, Schmitt S, Cardner M, Beerenwinkel N, Panke S, Held M. Discovery of antimicrobials by massively parallelized growth assays (Mex). Scientific Reports. 2022;12:4097. doi:10.1038/s41598-022-07755-7 PMID35260685 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/35260685/
RECORD: Rec_0390772 VERIFIED: YES
Provenance & Taxonomy
Micrococcus varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Lactobacillus plantarum (+)
PaperPubMed PMID: 8633879 PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0409786 VERIFIED: NO
Provenance & Taxonomy
Micrococcus varians [Bacterium]
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
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