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MYP_114155
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Basic Information
Variacin
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Standard
25 amino acids
C118H175N31O36S4
Standard
Sequence
GSGVIPTISHECHMNSFQFVFTCCS
Physicochemical Analysis
2732.10 Da
5.98
-1.09
-1.44
-0.0437
0.45
0.30
0.28
36.05
54.40
0.1200
0.00
125.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
1055.15
-12.85
39.0
41.0
84.0
189.0
6.0
26.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0048349 VERIFIED: YES
Provenance & Taxonomy
Kocuria varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Listeria monocytogenes
++++ relative activity grade
Agar diffusion/susceptibility assay (semiquantitative)
PaperPubMed PMID: 8633879 PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0054626 VERIFIED: YES
Provenance & Taxonomy
Lactococcus lactis [Bacterium]
Bacteriocin
1358
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial
Lactobacillus helveticus (5 strains, +++); Lactobacillus bulgaricus (4 strains, +++); Lactococcus lactis (2 strains, ++); Lactobacillus delbrueckii (2 strains, +++); Lactobacillus acidophilus (4 strains, ++); Lactobacillus plantarum (2 strains, +); Lactobacillus sake LSK (++); Lactobacillus curvatus (++); Leuconostoc mesenteroides (2 strains, +); Streptococcus thermophilus (6 strains, ++); Lactococcus lactis SL2 (++); Enterococcus faecalis (++); Enterococcus faecium (2 strains, ++); Listeria innocua (++); Listeria monocytogenes (++++)
++++ relative activity grade
Agar diffusion/susceptibility assay (semiquantitative)
PaperVariacin, a new lanthionine-containing bacteriocin produced by Micrococcus varians: comparison to lacticin 481 of Lactococcus lactis PMID8633879
RECORD: Rec_0071995 VERIFIED: YES
Provenance & Taxonomy
Kocuria varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Streptococcus thermophilus
Qualitative antimicrobial susceptibility assay
PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0085058 VERIFIED: YES
Provenance & Taxonomy
Kocuria varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Lactobacillus helveticus
+++ relative activity grade
Agar diffusion/susceptibility assay (semiquantitative)
PaperPubMed PMID: 8633879 PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
RECORD: Rec_0114844 VERIFIED: YES
Provenance & Taxonomy
Kocuria varians [Bacterium]
Bacteriocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive
Lactobacillus helveticus
Qualitative antimicrobial susceptibility assay
PMID8633879 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/8633879/
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