Peptide Database

Peptide NamePeptide chain C in PDB 1M93

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC165H245N43O46

DescriptionStandard

        TNEFSADHPFIYVIRHVDGKILFVGRYSSPT
    

Molecular Weight3566.97 Da

Isoelectric Point (pI)6.62

Net Charge (pH 7.0)-0.43

Net Charge (pH 7.4) -0.72

Charge Density (pH 7.0) -0.0137

GRAVY Index-0.12

Hydrophobic Moment 0.53

Boman Index0.10

Instability Index24.69

Aliphatic Index 81.61

Aromaticity 0.1613

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1422.52

LogP -11.97

H-bond Donors 50.0

H-bond Acceptors 48.0

Rotatable Bonds 110.0

Heavy Atoms 254.0

Ring Count 9.0

Amide Bonds 31.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0177182 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1M93 receptor chain B

MethodProtein-peptide complex structure