Peptide Database

Peptide NameCycloviolacin Y1

Function Ontology

—

Standard StatusStandard

Sequence Length23 amino acids

Chemical FormulaC102H152N26O32S5

DescriptionStandard

        GGNPIVCGETCFFQKCYTPGCSC
    

Molecular Weight2414.78 Da

Isoelectric Point (pI)5.97

Net Charge (pH 7.0)-0.29

Net Charge (pH 7.4) -0.57

Charge Density (pH 7.0) -0.0125

GRAVY Index0.18

Hydrophobic Moment 0.35

Boman Index0.20

Instability Index13.50

Aliphatic Index 29.57

Aromaticity 0.1304

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 916.36

LogP -11.72

H-bond Donors 35.0

H-bond Acceptors 37.0

Rotatable Bonds 72.0

Heavy Atoms 165.0

Ring Count 5.0

Amide Bonds 24.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0040260 VERIFIED: YES

Provenance & Taxonomy

OrganismClitoria ternatea [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)