Peptide Database

Peptide NamePeptide chain A in PDB 1CA0

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC48H82N12O14S

DescriptionStandard

        CGVPAIQPVLS
    

Molecular Weight1083.30 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.25

Net Charge (pH 7.4) -0.47

Charge Density (pH 7.0) -0.0227

GRAVY Index1.19

Hydrophobic Moment 0.33

Boman Index0.47

Instability Index79.13

Aliphatic Index 132.73

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 400.06

LogP -3.50

H-bond Donors 13.0

H-bond Acceptors 15.0

Rotatable Bonds 30.0

Heavy Atoms 75.0

Ring Count 2.0

Amide Bonds 11.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0204280 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1CA0 receptor chain B

MethodProtein-peptide complex structure