Peptide Database

Peptide NameVarv peptide G

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC125H190N36O42S6

DescriptionStandard

        GLPVCGETCFGGTCNTPGCSCDPWPVCSRN
    

Molecular Weight3061.45 Da

Isoelectric Point (pI)4.37

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0432

GRAVY Index-0.05

Hydrophobic Moment 0.31

Boman Index0.12

Instability Index51.73

Aliphatic Index 32.33

Aromaticity 0.0667

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5875.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1211.68

LogP -17.98

H-bond Donors 46.0

H-bond Acceptors 47.0

Rotatable Bonds 87.0

Heavy Atoms 209.0

Ring Count 7.0

Amide Bonds 31.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0003211 VERIFIED: YES

Provenance & Taxonomy

OrganismViola arvensis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0136282 VERIFIED: NO

Provenance & Taxonomy

OrganismViola arvensis [Plant]

Structure & Mods

Configcyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfide5-19; 9-21; 14-27

Bio-Activity Profile

Function

Antimicrobial