Peptide Database

Peptide NameAntimicrobial peptide Vv-AMP25/26

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC138H201N41O59S8

DescriptionStandard

        AQDCGCSSDQCCSQWGYCGTGDDYCGTGCQSGPCTS
    

Molecular Weight3634.83 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-4.28

Net Charge (pH 7.4) -4.59

Charge Density (pH 7.0) -0.1189

GRAVY Index-0.56

Hydrophobic Moment 0.27

Boman Index-0.01

Instability Index26.08

Aliphatic Index 2.78

Aromaticity 0.0833

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1612.68

LogP -29.56

H-bond Donors 63.0

H-bond Acceptors 63.0

Rotatable Bonds 112.0

Heavy Atoms 246.0

Ring Count 5.0

Amide Bonds 39.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0368200 VERIFIED: NO

Provenance & Taxonomy

OrganismVitis vinifera [Plant]

Structure & Mods

Configcyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfide4-12; 6-18; 11-25; 29-34

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0402363 VERIFIED: YES

Provenance & Taxonomy

OrganismVitis vinifera [Plant]

Tax ID29760

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial