Peptide Database

Peptide NamePp-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC167H272N52O53S5

DescriptionStandard

        KSCCPSTSARNIYNTCRFTGGSRPFCASLSGCKIVDGK
    

Molecular Weight4016.59 Da

Isoelectric Point (pI)9.30

Net Charge (pH 7.0)4.71

Net Charge (pH 7.4) 4.43

Charge Density (pH 7.0) 0.1239

GRAVY Index-0.26

Hydrophobic Moment 0.63

Boman Index-0.09

Instability Index46.59

Aliphatic Index 43.68

Aromaticity 0.0789

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1711.98

LogP -25.71

H-bond Donors 67.0

H-bond Acceptors 63.0

Rotatable Bonds 130.0

Heavy Atoms 277.0

Ring Count 5.0

Amide Bonds 39.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0229281 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsella rubella [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)