Peptide Database

Peptide NamePeptide chain C in PDB 5J28

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length33 amino acids

Chemical FormulaC168H272N54O46S

DescriptionStandard

        RRRVSFGGHLRPELFDENLPPNMPLKRGEAPTK
    

Molecular Weight3816.36 Da

Isoelectric Point (pI)10.78

Net Charge (pH 7.0)2.85

Net Charge (pH 7.4) 2.59

Charge Density (pH 7.0) 0.0865

GRAVY Index-1.11

Hydrophobic Moment 0.29

Boman Index-0.30

Instability Index102.10

Aliphatic Index 59.09

Aromaticity 0.0606

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1616.63

LogP -15.83

H-bond Donors 55.0

H-bond Acceptors 51.0

Rotatable Bonds 123.0

Heavy Atoms 269.0

Ring Count 8.0

Amide Bonds 34.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0215451 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5J28 receptor chain A

MethodProtein-peptide complex structure