Peptide Database

Peptide Name#5653 derived from HIV-1 integrase

Function Ontology

Antimicrobial

Antiviral

Antiviral ▸ Anti-HIV ▸ Anti-HIV-1

Antiviral ▸ Antiviral mechanism ▸ Viral replication inhibition

Enzyme modulation ▸ Enzyme inhibition ▸ Reverse transcriptase inhibition

Standard StatusStandard

Sequence Length15 amino acids

Chemical FormulaC73H111N19O23S2

DescriptionStandard

        VDCSPGIWQLDCTHL
    

Molecular Weight1686.91 Da

Isoelectric Point (pI)4.20

Net Charge (pH 7.0)-2.20

Net Charge (pH 7.4) -2.49

Charge Density (pH 7.0) -0.1464

GRAVY Index0.21

Hydrophobic Moment 0.21

Boman Index0.22

Instability Index44.68

Aliphatic Index 97.33

Aromaticity 0.0667

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5625.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 664.55

LogP -5.75

H-bond Donors 24.0

H-bond Acceptors 24.0

Rotatable Bonds 50.0

Heavy Atoms 117.0

Ring Count 4.0

Amide Bonds 15.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0288476 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

N-TermNone

C-TermNone

Bio-Activity Profile

Function

Antimicrobial Antiviral

FIRST PREV 1 2

Showing 1 records on this page Ã‚Â· Page 2 of 2